Introduction to bioinformatics :
Introduction to bioinformatics : a theoretical and practical approach /
edited by Stephen A. Krawetz and David D. Womble.
- Totowa, N.J. : Humana Press, c2003.
- xii, 746 p. : ill. ; 26 cm. +
Includes bibliographical references and index.
Part I. Biochemistry, cell, and molecular biology: A. The Cell. Nucleic acids and proteins: modern linguistics for the genomics and bioinformatics era / Bradley C. Hyman --
Structure and function of cell organelles / Jon Holy --
Cell signaling / Daniel A. Rappolee --
B. Transcription and translatio. DNA replication, repair, and recombination / Linda B. Bloom --
Transcription, RNA processing, and translation / Thomas P. Yang and Thomas W. O'Brien --
Part II. Molecular genetics: A. Genomics. Epigenetic mechanisms regulating gene expression / John R. McCarrey --
Gene families and evolution / Ben F. Koop --
Repetitive DNA: detection, annotation, and analysis / Jerzy Jurka --
Molecular genetics of disease and the human genome project / Paromita Deb-Rinker and Stephen W. Scherer --
B. Clinical human genetics. Heredity / C.A. Rupar --
The clinical genetics databases / Peter J. Bridge --
Poulation genetics / Jill S. Barnholtz-Sloan. The UNIX operating system: A. Basics and installation. Introduction to UNIX for biologists / David D. Womble --
Installation of the sun solaris (TM) operating environment / Bryon Campbell --
Sun system administration / Bryon Campbell --
B. Managing bioinformatics tools. Installing bioinformatics software in a server-based computing environment / Brian Fristensky --
Management of a server-based bioinformatics resource / Brian Fristensky --
C. Command line sequence analysis. GCG file management / Sittichoke Saisanit --
Part IV. Computer applications: A. Management and alalysis of DNA sequencing projects and sequences. Managing sequencing projects in the GAP4 environment / Rodger Staden, David P. Judge, and James K. Bonfield --
OLIGO primer analysis software / John D. Offerman and Wojciech Rychlik --
Statistical modeling of DNA seuences and patterns / Gautam B. Singh --
Statistical mining of the matrix attachment regions in geonomic sequences / Gautam B. Singh --
Analyzing sequences using the Staden package and EMBOSS / Rodger Staden, David P. Judge, and James K. Bonfield --
B. The genome database: analysis and similarity searching. Ensembl: an open-source software tool for large-scale genome analysis / James W. Stalker and Anthony V. Cox --
The PIR for functional genomics and proteomics / Cathy H. Wu. Sequence similarity and database searching / David S. Wishart --
GCG database searching / David J. Heard --
C. Identifying functional and structural sequence elements. Pattern discovery: methods and software / Brona Brejova, Tomas Vinar, and Ming Li --
The role of transcription factor binding sites in promoters and their In Silico detection / Thomas Werner --
An introduction to multiple sequence alignment and analysis / Steven M. Thompson --
3D molecular visualization with protein explorer / Eric Martz --
Multiple sequence alignment and analysis: the Seqlab interface: a practical guide / Steven M. Thompson --
D. Analysis of gene expression: microarrays and other tools. Overview of the tools for microarray analysis: transcription profiling, DNA chips, and differential display / Jeffrey A. Kramer --
Microarays: tools for gene expression analysis / Sorin Draghici --
Knowledge discovery from the human transcriptome / Kousaku Okubo and Teruyoshi Hishiki.l. TOC
Summary:
Offers scientists with both a biological framework to understand the questions life scientist confront in the context of the computational issues and tools that are available for scientific research. Read more...
1588290646 (alk. paper) 9781588290649
2002190207
Bioinformatics.
Computational Biology--methods.
Computer Systems.
QH507 / .I575 2003
570.201 / INT 2003
QH 506 / I646 2002
Includes bibliographical references and index.
Part I. Biochemistry, cell, and molecular biology: A. The Cell. Nucleic acids and proteins: modern linguistics for the genomics and bioinformatics era / Bradley C. Hyman --
Structure and function of cell organelles / Jon Holy --
Cell signaling / Daniel A. Rappolee --
B. Transcription and translatio. DNA replication, repair, and recombination / Linda B. Bloom --
Transcription, RNA processing, and translation / Thomas P. Yang and Thomas W. O'Brien --
Part II. Molecular genetics: A. Genomics. Epigenetic mechanisms regulating gene expression / John R. McCarrey --
Gene families and evolution / Ben F. Koop --
Repetitive DNA: detection, annotation, and analysis / Jerzy Jurka --
Molecular genetics of disease and the human genome project / Paromita Deb-Rinker and Stephen W. Scherer --
B. Clinical human genetics. Heredity / C.A. Rupar --
The clinical genetics databases / Peter J. Bridge --
Poulation genetics / Jill S. Barnholtz-Sloan. The UNIX operating system: A. Basics and installation. Introduction to UNIX for biologists / David D. Womble --
Installation of the sun solaris (TM) operating environment / Bryon Campbell --
Sun system administration / Bryon Campbell --
B. Managing bioinformatics tools. Installing bioinformatics software in a server-based computing environment / Brian Fristensky --
Management of a server-based bioinformatics resource / Brian Fristensky --
C. Command line sequence analysis. GCG file management / Sittichoke Saisanit --
Part IV. Computer applications: A. Management and alalysis of DNA sequencing projects and sequences. Managing sequencing projects in the GAP4 environment / Rodger Staden, David P. Judge, and James K. Bonfield --
OLIGO primer analysis software / John D. Offerman and Wojciech Rychlik --
Statistical modeling of DNA seuences and patterns / Gautam B. Singh --
Statistical mining of the matrix attachment regions in geonomic sequences / Gautam B. Singh --
Analyzing sequences using the Staden package and EMBOSS / Rodger Staden, David P. Judge, and James K. Bonfield --
B. The genome database: analysis and similarity searching. Ensembl: an open-source software tool for large-scale genome analysis / James W. Stalker and Anthony V. Cox --
The PIR for functional genomics and proteomics / Cathy H. Wu. Sequence similarity and database searching / David S. Wishart --
GCG database searching / David J. Heard --
C. Identifying functional and structural sequence elements. Pattern discovery: methods and software / Brona Brejova, Tomas Vinar, and Ming Li --
The role of transcription factor binding sites in promoters and their In Silico detection / Thomas Werner --
An introduction to multiple sequence alignment and analysis / Steven M. Thompson --
3D molecular visualization with protein explorer / Eric Martz --
Multiple sequence alignment and analysis: the Seqlab interface: a practical guide / Steven M. Thompson --
D. Analysis of gene expression: microarrays and other tools. Overview of the tools for microarray analysis: transcription profiling, DNA chips, and differential display / Jeffrey A. Kramer --
Microarays: tools for gene expression analysis / Sorin Draghici --
Knowledge discovery from the human transcriptome / Kousaku Okubo and Teruyoshi Hishiki.l. TOC
Summary:
Offers scientists with both a biological framework to understand the questions life scientist confront in the context of the computational issues and tools that are available for scientific research. Read more...
1588290646 (alk. paper) 9781588290649
2002190207
Bioinformatics.
Computational Biology--methods.
Computer Systems.
QH507 / .I575 2003
570.201 / INT 2003
QH 506 / I646 2002